Sacu_v1.1_s0019.g007775

Description : component *(bS21c) of small plastid ribosomal-subunit proteome & original description: CDS=204-695

Gene families : OG0004103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004103_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0019.g007775

Target	Alias	Description	ECC score	Gene Family Method
AT3G27160	GHS1	Ribosomal protein S21 family protein	0.07	OrthoFinder output from all 47 species
Aev_g09196	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Als_g01448	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Aob_g02683	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Aop_g18482	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Aspi01Gene18967.t1	Aspi01Gene18967	component *(bS21c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Azfi_s0003.g007465	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.14	OrthoFinder output from all 47 species
Cba_g02864	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Cba_g08732	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ceric.13G030700.1	Ceric.13G030700	component *(bS21c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Cre01.g017300	No alias	Protein biosynthesis.organelle translation...	0.1	OrthoFinder output from all 47 species
Dac_g01906	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Dcu_g41032	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Dde_g05601	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Ehy_g00353	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
LOC_Os02g09590.1	GHS1, LOC_Os02g09590	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.09	OrthoFinder output from all 47 species
Len_g15740	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Lfl_g02717	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.11	OrthoFinder output from all 47 species
Mp4g21580.1	No alias	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.17	OrthoFinder output from all 47 species
Msp_g36586	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Nbi_g05106	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Ore_g01870	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Ore_g05303	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Ppi_g01614	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Smo444102	No alias	Protein biosynthesis.organelle translation...	0.06	OrthoFinder output from all 47 species
Solyc02g068090.3.1	GHS1, Solyc02g068090	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.09	OrthoFinder output from all 47 species
Spa_g18473	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Tin_g07965	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Zm00001e025066_P001	GHS1, Zm00001e025066	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006771	riboflavin metabolic process	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009231	riboflavin biosynthetic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042726	flavin-containing compound metabolic process	IEP	HCCA
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	HCCA
CC	GO:0043190	ATP-binding cassette (ABC) transporter complex	IEP	HCCA
CC	GO:0098533	ATPase dependent transmembrane transport complex	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001911	Ribosomal_S21	70	123

External Links

No external refs found!

Sacu_v1.1_s0019.g007775

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation