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  5. Sacu_v1.1_s0019.g007731

Sacu_v1.1_s0019.g007731


Description : regulatory component *(RPT4) of 26S proteasome & original description: CDS=50-1255


Gene families : OG0004670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0019.g007731
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Aev_g05319 RPT4A regulatory component *(RPT4) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.6 No alias Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Ore_g06165 RPT4A regulatory component *(RPT4) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 334 376
IPR003959 ATPase_AAA_core 178 311
IPR032501 Prot_ATP_ID_OB_C 65 120
No external refs found!