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  5. Sacu_v1.1_s0019.g007729

Sacu_v1.1_s0019.g007729


Description : regulatory protein of RNA homeostasis & original description: CDS=281-1984


Gene families : OG0001312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001312_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0019.g007729

Target Alias Description ECC score Gene Family Method Actions
Adi_g039804 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aob_g10875 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Lfl_g03335 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g12999 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Spa_g15856 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!