AMTR_s00149p00026500 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00149.8

Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit

Gene families : OG_01_0005394 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005394_tree ,
OG_02_0006074 (LandPlants) Phylogenetic Tree(s): OG_02_0006074_tree ,
OG_03_0006574 (SeedPlants) Phylogenetic Tree(s): OG_03_0006574_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00149p00026500
Cluster	HCCA: Cluster_241

Target	Alias	Description	ECC score	Gene Family Method
AT5G20890	No alias	TCP-1/cpn60 chaperonin family protein	0.07	Archaeplastida
Cpa\|evm.model.tig00020903.30	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.03	Archaeplastida
Cre09.g416750	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.05	Archaeplastida
GSVIVT01008708001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.05	Archaeplastida
LOC_Os03g42220.1	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.09	Archaeplastida
LOC_Os05g48290.3	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.08	Archaeplastida
MA_10434959g0010	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.05	Archaeplastida
Mp5g16030.1	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.05	Archaeplastida
Pp3c5_16830V3.1	No alias	TCP-1/cpn60 chaperonin family protein	0.02	Archaeplastida
Pp3c6_15940V3.1	No alias	TCP-1/cpn60 chaperonin family protein	0.05	Archaeplastida
Smo171093	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.04	Archaeplastida
Solyc11g069000.2.1	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.08	Archaeplastida
Zm00001e017228_P001	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.05	Archaeplastida
Zm00001e025595_P002	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.08	Archaeplastida
AT5G20890	No alias	TCP-1/cpn60 chaperonin family protein	0.07	LandPlants
GSVIVT01008708001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.05	LandPlants
LOC_Os03g42220.1	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.09	LandPlants
LOC_Os05g48290.3	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.08	LandPlants
MA_10434959g0010	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.05	LandPlants
Mp5g16030.1	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.04	LandPlants
Pp3c5_16830V3.1	No alias	TCP-1/cpn60 chaperonin family protein	0.02	LandPlants
Pp3c6_15940V3.1	No alias	TCP-1/cpn60 chaperonin family protein	0.04	LandPlants
Smo171093	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.04	LandPlants
Solyc11g069000.2.1	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.08	LandPlants
Zm00001e017228_P001	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.05	LandPlants
Zm00001e025595_P002	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.08	LandPlants
AT5G20890	No alias	TCP-1/cpn60 chaperonin family protein	0.07	SeedPlants
GSVIVT01008708001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.05	SeedPlants
LOC_Os03g42220.1	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.09	SeedPlants
LOC_Os05g48290.3	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.08	SeedPlants
MA_10434959g0010	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.05	SeedPlants
Solyc11g069000.2.1	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.08	SeedPlants
Zm00001e017228_P001	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.05	SeedPlants
Zm00001e025595_P002	No alias	CCT2 subunit beta of CCT chaperonin folding complex	0.08	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/TCP-1	30	518

External Links

No external refs found!

AMTR_s00149p00026500 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation