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  5. Sacu_v1.1_s0018.g007560

Sacu_v1.1_s0018.g007560


Description : not classified & original description: CDS=1-456


Gene families : OG0001593 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001593_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0018.g007560

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00163260 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aob_g36098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01027732001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os04g10240.1 LOC_Os04g10240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g09132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g089670.3.1 Solyc09g089670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008637 HR_lesion 14 133
No external refs found!