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  5. Sacu_v1.1_s0018.g007426

Sacu_v1.1_s0018.g007426 (CKB1)


Aliases : CKB1

Description : regulatory subunit beta of CK-II kinase & original description: CDS=966-1361


Gene families : OG0001428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0018.g007426

Target Alias Description ECC score Gene Family Method Actions
AT5G47080 CKB1 casein kinase II beta chain 1 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.190 CKB1 Protein modification.phosphorylation.CMGC kinase... 0.01 OrthoFinder output from all 47 species
Solyc01g088740.4.1 CKB1, Solyc01g088740 regulatory subunit beta of CK-II kinase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005956 protein kinase CK2 complex IEA Interproscan
MF GO:0019887 protein kinase regulator activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
CC GO:0000776 kinetochore IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0034508 centromere complex assembly IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046937 phytochelatin metabolic process IEP HCCA
BP GO:0046938 phytochelatin biosynthetic process IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000704 Casein_kinase_II_reg-sub 39 129
IPR002885 Pentatricopeptide_repeat 99 118
IPR002885 Pentatricopeptide_repeat 1 22
IPR002885 Pentatricopeptide_repeat 33 57
No external refs found!