- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : SHI
Description : SRS-type transcription factor & original description: CDS=1-2160
Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00063p00161200 | LRP1,... | RNA biosynthesis.transcriptional activation.SRS... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G75520 | SRS5 | SHI-related sequence 5 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G51060 | SRS1, STY1 | Lateral root primordium (LRP) protein-related | 0.04 | OrthoFinder output from all 47 species | |
| AT5G66350 | SHI | Lateral root primordium (LRP) protein-related | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g045684 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g069569 | LRP1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g17440 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g46734 | SRS7 | SRS-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene30272.t1 | SHI, Aspi01Gene30272 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene65745.t1 | SHI, Aspi01Gene65745 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035783 | SHI | SRS-type transcription factor & original description: CDS=1-2148 | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0861.g090073 | SHI | SRS-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G035200.1 | SRS1, STY1,... | SRS-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.32G058400.1 | SRS1, STY1,... | SRS-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g24171 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g40676 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g02264 | SHI | SRS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01009812001 | SRS5 | RNA biosynthesis.transcriptional activation.SRS... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g72490.1 | LRP1, LOC_Os01g72490 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g32070.1 | LRP1, LOC_Os05g32070 | transcription factor (SRS) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g49830.1 | SRS1, STY1,... | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g43410.1 | SRS1, STY1,... | transcription factor (SRS) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os09g36160.1 | SRS1, STY1,... | transcription factor (SRS) | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g32454 | LRP1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g19510.1 | SHI | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g32313 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19370 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g14706 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g16685 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g59296 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0051.g013968 | SHI | SRS-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0150.g023316 | SRS1, STY1 | not classified & original description: CDS=12-590 | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g062400.3.1 | SRS1, STY1,... | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g054070.1.1 | SRS5, Solyc10g054070 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g31728 | SRS8 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g29778 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30774 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e004006_P001 | SHI, Zm00001e004006 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010227_P001 | SRS1, STY1,... | transcription factor (SRS) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e013256_P002 | SHI, Zm00001e013256 | transcription factor (SRS) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e026854_P001 | SHI, Zm00001e026854 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e028304_P001 | LRP1, Zm00001e028304 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e030189_P001 | SHI, Zm00001e030189 | transcription factor (SRS) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e031567_P001 | LRP1, Zm00001e031567 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e034798_P001 | SRS1, STY1,... | transcription factor (SRS) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |