Solyc09g066340.1.1 (Solyc09g066340.1)


Aliases : Solyc09g066340.1

Description : 17.5.2 hormone metabolism.ethylene.signal transduction encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein ?//CONTAINS one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc09g066340.1.1
Cluster HCCA cluster: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
GSVIVT01018270001 No alias No description available 0.02 Gene family
GSVIVT01018271001 No alias No description available 0.01 Gene family
GSVIVT01028314001 No alias No description available 0.01 Gene family
Solyc07g042230.1.1 Solyc07g042230.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 19 69
No external refs found!