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  5. Sacu_v1.1_s0016.g006958

Sacu_v1.1_s0016.g006958 (TEL1)


Aliases : TEL1

Description : not classified & original description: CDS=1-1983


Gene families : OG0003402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0016.g006958
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00120470 TEL1,... Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
AT1G37140 MCT1 MEI2 C-terminal RRM only like 1 0.03 OrthoFinder output from all 47 species
AT1G67770 TEL2 terminal EAR1-like 2 0.02 OrthoFinder output from all 47 species
Azfi_s1166.g098699 TEL2 not classified & original description: CDS=121-1656 0.01 OrthoFinder output from all 47 species
Ceric.02G098500.1 TEL1, Ceric.02G098500 not classified & original description: pacid=50585133... 0.03 OrthoFinder output from all 47 species
Ceric.21G063900.1 TEL1, Ceric.21G063900 not classified & original description: pacid=50602943... 0.03 OrthoFinder output from all 47 species
GSVIVT01024201001 MCT2 Protein terminal ear1 OS=Zea mays 0.03 OrthoFinder output from all 47 species
LOC_Os01g68000.1 TEL1, LOC_Os01g68000 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os09g36140.1 TEL1, LOC_Os09g36140 Protein MEI2-like 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Solyc05g013930.2.1 TEL1, Solyc05g013930 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 355.0) 0.03 OrthoFinder output from all 47 species
Solyc05g056360.2.1 MCT1, Solyc05g056360 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Tin_g44662 TEL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 364 429
No external refs found!