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  5. Sacu_v1.1_s0016.g006893

Sacu_v1.1_s0016.g006893


Description : not classified & original description: CDS=1775-4951


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0016.g006893
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00256680 evm_27.TU.AmTr_v1... PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Adi_g014208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre16.g691050 PRAF1 PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
Dac_g09907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23648 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008027001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.01 OrthoFinder output from all 47 species
Len_g02424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g24610.1 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Ppi_g13544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028312_P001 Zm00001e028312 PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR027988 BRX_N 844 872
IPR000408 Reg_chr_condens 370 419
IPR000408 Reg_chr_condens 486 535
IPR000408 Reg_chr_condens 315 367
IPR000408 Reg_chr_condens 264 312
IPR000408 Reg_chr_condens 540 587
IPR000408 Reg_chr_condens 437 483
IPR000306 Znf_FYVE 591 657
IPR013591 Brevis_radix_dom 982 1035
No external refs found!