Sacu_v1.1_s0016.g006820


Description : not classified & original description: CDS=1-3141


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0016.g006820
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Adi_g058520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088267 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21523 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30236 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18763 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30586 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g06550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G104800.1 Ceric.04G104800 not classified & original description: pacid=50632059... 0.04 OrthoFinder output from all 47 species
Ceric.05G023100.1 Ceric.05G023100 not classified & original description: pacid=50578135... 0.03 OrthoFinder output from all 47 species
Ceric.10G031100.1 Ceric.10G031100 not classified & original description: pacid=50612341... 0.03 OrthoFinder output from all 47 species
Ceric.11G019200.1 Ceric.11G019200 not classified & original description: pacid=50596467... 0.03 OrthoFinder output from all 47 species
Ceric.18G038700.1 Ceric.18G038700 not classified & original description: pacid=50621594... 0.03 OrthoFinder output from all 47 species
Ceric.18G062200.1 Ceric.18G062200 not classified & original description: pacid=50622099... 0.03 OrthoFinder output from all 47 species
Ceric.21G077300.1 Ceric.21G077300 not classified & original description: pacid=50604263... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g20901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21308 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g01384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06113 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15176 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26347 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02291 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03887 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03944 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g01164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00665 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0003352 regulation of cilium movement IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0032886 regulation of microtubule-based process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060632 regulation of microtubule-based movement IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 174 199
IPR002885 Pentatricopeptide_repeat 636 660
IPR002885 Pentatricopeptide_repeat 407 431
IPR002885 Pentatricopeptide_repeat 664 710
IPR002885 Pentatricopeptide_repeat 316 362
IPR002885 Pentatricopeptide_repeat 200 246
IPR002885 Pentatricopeptide_repeat 549 595
IPR002885 Pentatricopeptide_repeat 433 478
IPR002885 Pentatricopeptide_repeat 881 929
IPR002885 Pentatricopeptide_repeat 781 828
IPR002885 Pentatricopeptide_repeat 99 145
No external refs found!