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  5. Sacu_v1.1_s0016.g006812

Sacu_v1.1_s0016.g006812 (NYC1)


Aliases : NYC1

Description : not classified & original description: CDS=1-1035


Gene families : OG0008840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008840_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0016.g006812
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Adi_g007913 NOL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0629.g080128 NYC1 not classified & original description: CDS=270-1166 0.05 OrthoFinder output from all 47 species
Mp2g20360.1 NOL Probable chlorophyll(ide) b reductase NYC1,... 0.02 OrthoFinder output from all 47 species
Sam_g08052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 101 255
IPR002347 SDR_fam 41 87
No external refs found!