Sacu_v1.1_s0016.g006798 (TRP2, TSB1, ATTSB1, TRPB)


Aliases : TRP2, TSB1, ATTSB1, TRPB

Description : EC_4.2 carbon-oxygen lyase & original description: CDS=1-1467


Gene families : OG0002978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0016.g006798

Target Alias Description ECC score Gene Family Method Actions
Als_g43653 TRP2, TSB1, ATTSB1, TRPB not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g04180.1 TSB2, LOC_Os08g04180 subunit beta of tryptophan synthase complex 0.03 OrthoFinder output from all 47 species
Smo85784 TRP2, TSB1, ATTSB1, TRPB Amino acid metabolism.biosynthesis.shikimate... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004451 isocitrate lyase activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR001926 TrpB-like_PALP 153 480
No external refs found!