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  5. Sacu_v1.1_s0016.g006757

Sacu_v1.1_s0016.g006757 (ASA1, TRP5, AMT1, JDL1, WEI2)


Aliases : ASA1, TRP5, AMT1, JDL1, WEI2

Description : EC_4.1 carbon-carbon lyase & original description: CDS=1-2073


Gene families : OG0004515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0016.g006757
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0185.g056617 ASA1, TRP5,... EC_4.1 carbon-carbon lyase & original description: CDS=768-2633 0.03 OrthoFinder output from all 47 species
LOC_Os03g61120.1 ASA1, TRP5,... subunit alpha of anthranilate synthase complex 0.04 OrthoFinder output from all 47 species
Lfl_g12590 ATHANSYNAB, ASA2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13369 ATHANSYNAB, ASA2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03881 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12466 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37596 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011720_P001 ATHANSYNAB,... subunit alpha of anthranilate synthase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP HCCA
MF GO:0004797 thymidine kinase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019136 deoxynucleoside kinase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR015890 Chorismate_C 358 458
IPR015890 Chorismate_C 475 672
IPR006805 Anth_synth_I_N 142 296
No external refs found!