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  5. Sacu_v1.1_s0016.g006743

Sacu_v1.1_s0016.g006743 (SPI)


Aliases : SPI

Description : not classified & original description: CDS=82-10662


Gene families : OG0003198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003198_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0016.g006743
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Ehy_g17971 SPI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g08661 SPI not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR023362 PH-BEACH_dom 2795 2845
IPR000409 BEACH_dom 2883 3161
IPR046851 NBCH_WD40 3219 3378
No external refs found!