Sacu_v1.1_s0015.g006707 (REV1, ATREV1)

Aliases : REV1, ATREV1

Description : DNA polymerase *(REV1) & original description: CDS=168-3257

Gene families : OG0005198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005198_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0015.g006707
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
Aop_g19611	REV1, ATREV1	DNA polymerase *(REV1) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.1Z081200.1	REV1, ATREV1,...	DNA polymerase *(REV1) & original description:...	0.03	OrthoFinder output from all 47 species
Lfl_g16582	REV1, ATREV1	DNA polymerase *(REV1) & original description: none	0.03	OrthoFinder output from all 47 species
MA_113371g0010	REV1, ATREV1	DNA polymerase (REV1)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003684	damaged DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001126	UmuC	381	525
IPR024728	PolY_HhH_motif	540	569
IPR001357	BRCT_dom	79	166
IPR017961	DNA_pol_Y-fam_little_finger	613	730

External Links

No external refs found!

Sacu_v1.1_s0015.g006707 (REV1, ATREV1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation