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  5. Sacu_v1.1_s0015.g006557

Sacu_v1.1_s0015.g006557


Description : regulatory protein *(ASPM) of microtubule minus-end stability & original description: CDS=125-5272


Gene families : OG0007675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007675_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0015.g006557

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00143230 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00062p00144520 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001335.3 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g09930 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.03 OrthoFinder output from all 47 species
Len_g09758 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.03 OrthoFinder output from all 47 species
MA_10431293g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g06540.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g08418 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 1143 1162
IPR000048 IQ_motif_EF-hand-BS 958 976
IPR000048 IQ_motif_EF-hand-BS 1236 1253
IPR000048 IQ_motif_EF-hand-BS 812 829
IPR000048 IQ_motif_EF-hand-BS 1375 1394
IPR000048 IQ_motif_EF-hand-BS 980 1000
IPR000048 IQ_motif_EF-hand-BS 1049 1066
IPR000048 IQ_motif_EF-hand-BS 1276 1294
IPR000048 IQ_motif_EF-hand-BS 1168 1186
IPR000048 IQ_motif_EF-hand-BS 1071 1090
IPR000048 IQ_motif_EF-hand-BS 886 903
IPR000048 IQ_motif_EF-hand-BS 1398 1416
IPR000048 IQ_motif_EF-hand-BS 1189 1209
IPR001715 CH_dom 479 577
No external refs found!