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  5. Sacu_v1.1_s0015.g006510

Sacu_v1.1_s0015.g006510


Description : component *(uL4m) of large mitoribosomal-subunit proteome & original description: CDS=575-1405


Gene families : OG0005986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005986_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0015.g006510

Target Alias Description ECC score Gene Family Method Actions
Cre12.g520400 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g03282 No alias component *(uL4m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os11g37510.1 LOC_Os11g37510 component mtRPL4 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Mp4g00020.1 No alias component mtRPL4 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Msp_g25367 No alias component *(uL4m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Smo227946 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR023577 CYTH_domain 2 179
IPR002136 Ribosomal_L4/L1e 63 227
No external refs found!