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  5. Ehy_g06146

Ehy_g06146


Description : heavy chain of clathrin triskelion & original description: none


Gene families : OG0000308 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g06146

Target Alias Description ECC score Gene Family Method Actions
AT3G11130 No alias Clathrin, heavy chain 0.01 OrthoFinder output from all 39 species
Azfi_s0078.g038251 No alias heavy chain of clathrin triskelion & original... 0.01 OrthoFinder output from all 39 species
Ceric.06G067200.1 Ceric.06G067200 heavy chain of clathrin triskelion & original... 0.01 OrthoFinder output from all 39 species
Ceric.1Z011000.1 Ceric.1Z011000 heavy chain of clathrin triskelion & original... 0.01 OrthoFinder output from all 39 species
Dde_g02557 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Msp_g26122 No alias heavy chain of clathrin triskelion & original description: none 0.01 OrthoFinder output from all 39 species
Nbi_g03873 No alias heavy chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 39 species
Pir_g30491 No alias heavy chain of clathrin triskelion & original description: none 0.01 OrthoFinder output from all 39 species
Ppi_g29284 No alias heavy chain of clathrin triskelion & original description: none 0.01 OrthoFinder output from all 39 species
Solyc03g096000.3.1 Solyc03g096000 heavy chain of clathrin triskelion 0.01 OrthoFinder output from all 39 species
Solyc05g052510.4.1 Solyc05g052510 heavy chain of clathrin triskelion 0.01 OrthoFinder output from all 39 species
Solyc06g051310.3.1 Solyc06g051310 heavy chain of clathrin triskelion 0.01 OrthoFinder output from all 39 species
Zm00001e009296_P003 Zm00001e009296 heavy chain of clathrin triskelion 0.01 OrthoFinder output from all 39 species
Zm00001e020822_P001 Zm00001e020822 heavy chain of clathrin triskelion 0.01 OrthoFinder output from all 39 species
Zm00001e023940_P002 Zm00001e023940 heavy chain of clathrin triskelion 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000547 Clathrin_H-chain/VPS_repeat 418 549
IPR000547 Clathrin_H-chain/VPS_repeat 708 847
IPR000547 Clathrin_H-chain/VPS_repeat 118 251
IPR000547 Clathrin_H-chain/VPS_repeat 261 400
IPR000547 Clathrin_H-chain/VPS_repeat 3 108
IPR000547 Clathrin_H-chain/VPS_repeat 558 699
No external refs found!