Sacu_v1.1_s0014.g006313


Description : not classified & original description: CDS=1875-2780


Gene families : OG0005186 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005186_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0014.g006313
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Aev_g02334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.74 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre12.g508350 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g06538 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g43059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11878 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g13153 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01031157001 No alias No description available 0.02 OrthoFinder output from all 47 species
Len_g19670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g22870.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g24783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g12159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16550 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo410377 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc10g044710.2.1 Solyc10g044710 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g49857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e026254_P001 Zm00001e026254 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004371 glycerone kinase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!