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  5. Sacu_v1.1_s0014.g006186

Sacu_v1.1_s0014.g006186 (GABA-T, HER1, POP2)


Aliases : GABA-T, HER1, POP2

Description : EC_2.6 transferase transferring nitrogenous group & original description: CDS=1-1617


Gene families : OG0004682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004682_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0014.g006186

Target Alias Description ECC score Gene Family Method Actions
Als_g21330 GABA-T, HER1, POP2 EC_2.6 transferase transferring nitrogenous group &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13444.t1 GABA-T, HER1,... EC_2.6 transferase transferring nitrogenous group &... 0.03 OrthoFinder output from all 47 species
LOC_Os04g52450.1 GABA-T, HER1,... GABA pyruvate transaminase 0.03 OrthoFinder output from all 47 species
LOC_Os08g10510.1 GABA-T, HER1,... GABA pyruvate transaminase 0.02 OrthoFinder output from all 47 species
Ppi_g40903 GABA-T, HER1, POP2 EC_2.6 transferase transferring nitrogenous group &... 0.02 OrthoFinder output from all 47 species
Zm00001e006948_P001 GABA-T, HER1,... GABA pyruvate transaminase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR005814 Aminotrans_3 159 524
No external refs found!