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  5. Sacu_v1.1_s0014.g006174

Sacu_v1.1_s0014.g006174


Description : not classified & original description: CDS=16-1263


Gene families : OG0004023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0014.g006174

Target Alias Description ECC score Gene Family Method Actions
Adi_g017907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15637 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g17571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024689 No alias not classified & original description: CDS=239-2569 0.03 OrthoFinder output from all 47 species
Azfi_s0336.g065546 No alias not classified & original description: CDS=1-2493 0.05 OrthoFinder output from all 47 species
Cba_g25946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g57127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G037000.1 Ceric.12G037000 not classified & original description: pacid=50600637... 0.04 OrthoFinder output from all 47 species
Ceric.1Z219100.1 Ceric.1Z219100 not classified & original description: pacid=50617071... 0.05 OrthoFinder output from all 47 species
Ceric.23G078700.1 Ceric.23G078700 not classified & original description: pacid=50610433... 0.03 OrthoFinder output from all 47 species
Len_g14876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g13127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10297 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40231 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003879 ATP phosphoribosyltransferase activity IEP HCCA
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008837 diaminopimelate epimerase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0047661 amino-acid racemase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 21 81
IPR002885 Pentatricopeptide_repeat 102 149
No external refs found!