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  5. Sacu_v1.1_s0014.g006113

Sacu_v1.1_s0014.g006113


Description : not classified & original description: CDS=1-1230


Gene families : OG0000271 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0014.g006113

Target Alias Description ECC score Gene Family Method Actions
Adi_g014049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g047558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21259 SRC2, (AT)SRC2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0435.g069920 SRC2, (AT)SRC2 not classified & original description: CDS=1-741 0.04 OrthoFinder output from all 47 species
Ceric.01G000800.1 Ceric.01G000800 not classified & original description: pacid=50592633... 0.03 OrthoFinder output from all 47 species
Gb_09310 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g04810 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.04 OrthoFinder output from all 47 species
Nbi_g11256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo440190 No alias No description available 0.03 OrthoFinder output from all 47 species
Zm00001e023611_P001 Zm00001e023611 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 228 329
No external refs found!