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  5. Sacu_v1.1_s0014.g006083

Sacu_v1.1_s0014.g006083 (GIF3)


Aliases : GIF3

Description : cofactor component *(GIF) of GRF-GIF transcriptional complex & original description: CDS=250-960


Gene families : OG0001681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001681_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0014.g006083

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0013.g013241 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
Cba_g07380 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
Ceric.29G051000.1 GIF3, Ceric.29G051000 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
Dcu_g03501 GIF1, GIF, ATGIF1, AN3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.05 OrthoFinder output from all 47 species
GSVIVT01027418001 GIF3 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.03 OrthoFinder output from all 47 species
GSVIVT01036262001 GIF1, GIF, ATGIF1, AN3 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.04 OrthoFinder output from all 47 species
Ppi_g07371 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.02 OrthoFinder output from all 47 species
Sam_g06466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14092 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031390 Ctf18 RFC-like complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR007726 SS18_N 20 75
No external refs found!