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  5. Sacu_v1.1_s0014.g006017

Sacu_v1.1_s0014.g006017


Description : Trihelix-type transcription factor & original description: CDS=840-1835


Gene families : OG0001890 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001890_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0014.g006017

Target Alias Description ECC score Gene Family Method Actions
AT2G38250 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G01380 No alias Homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g113970 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09969 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15411 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07880.t1 Aspi01Gene07880 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19503 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436704g0010 No alias transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Ppi_g06854 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g005560.4.1 Solyc09g005560 transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
Spa_g03613 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g51759 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004451 isocitrate lyase activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 59 143
No external refs found!