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  5. Sacu_v1.1_s0013.g005950

Sacu_v1.1_s0013.g005950


Description : not classified & original description: CDS=281-1216


Gene families : OG0006911 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006911_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0013.g005950
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Als_g29785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63847 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38930 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 173 208
No external refs found!