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  5. Sacu_v1.1_s0013.g005833

Sacu_v1.1_s0013.g005833


Description : not classified & original description: CDS=1-537


Gene families : OG0001077 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0013.g005833
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT1G20780 PUB44, SAUL1, ATPUB44 senescence-associated E3 ubiquitin ligase 1 0.03 OrthoFinder output from all 47 species
Aob_g04473 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G057700.1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description:... 0.02 OrthoFinder output from all 47 species
LOC_Os03g45420.1 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.05 OrthoFinder output from all 47 species
MA_10427526g0010 No alias E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
MA_99491g0010 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Msp_g13315 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05726 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023438_P004 Zm00001e023438 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Zm00001e023512_P001 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004860 protein kinase inhibitor activity IEP HCCA
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA

No InterPro domains available for this sequence

No external refs found!