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  5. Sacu_v1.1_s0013.g005823

Sacu_v1.1_s0013.g005823


Description : not classified & original description: CDS=1-1830


Gene families : OG0002239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0013.g005823
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT5G04020 No alias calmodulin binding 0.03 OrthoFinder output from all 47 species
Ceric.29G071400.1 Ceric.29G071400 not classified & original description: pacid=50625175... 0.03 OrthoFinder output from all 47 species
Ehy_g05601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48932 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR012417 CaM-bd_dom_pln 533 607
No external refs found!