Sacu_v1.1_s0013.g005749

Description : not classified & original description: CDS=114-1958

Gene families : OG0005773 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005773_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0013.g005749
Cluster	HCCA: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
MA_10437239g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Pir_g15488	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g39037	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g036330.3.1	Solyc02g036330	26S proteasome regulatory subunit S10B homolog B...	0.03	OrthoFinder output from all 47 species
Tin_g45106	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e015776_P001	Zm00001e015776	26S proteasome regulatory subunit 6B homolog...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0031047	RNA-mediated gene silencing	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0045927	positive regulation of growth	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019587	Polyketide_cyclase/dehydratase	25	163
IPR003959	ATPase_AAA_core	367	495

External Links

No external refs found!