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  5. Sacu_v1.1_s0012.g005529

Sacu_v1.1_s0012.g005529


Description : not classified & original description: CDS=1-426


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0012.g005529

Target Alias Description ECC score Gene Family Method Actions
Ala_g26587 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02052.t1 Aspi01Gene02052 histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02058.t1 Aspi01Gene02058 histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42452.t1 Aspi01Gene42452 histone H3 variant *(CENH3) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000203.27 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre16.g661450 No alias Cell cycle.mitosis and meiosis.chromosome... 0.02 OrthoFinder output from all 47 species
Dde_g12203 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31882 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31884 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g10158 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25338 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 52 142
No external refs found!