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  5. Sacu_v1.1_s0012.g005470

Sacu_v1.1_s0012.g005470


Description : not classified & original description: CDS=1-879


Gene families : OG0000697 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000697_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0012.g005470
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00025220 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At3g56230... 0.02 OrthoFinder output from all 47 species
AT3G56230 No alias BTB/POZ domain-containing protein 0.03 OrthoFinder output from all 47 species
GSVIVT01032719001 No alias BTB/POZ domain-containing protein At3g56230... 0.06 OrthoFinder output from all 47 species
LOC_Os11g02070.1 LOC_Os11g02070 BTB/POZ domain-containing protein At3g56230... 0.09 OrthoFinder output from all 47 species
LOC_Os11g41350.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.04 OrthoFinder output from all 47 species
LOC_Os12g02030.1 LOC_Os12g02030 BTB/POZ domain-containing protein At3g56230... 0.03 OrthoFinder output from all 47 species
Mp1g13890.1 No alias BTB/POZ domain-containing protein At3g56230... 0.04 OrthoFinder output from all 47 species
Mp7g11260.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g13450.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g13460.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Smo92030 No alias BTB/POZ domain-containing protein At3g56230... 0.02 OrthoFinder output from all 47 species
Solyc06g050860.3.1 Solyc06g050860 BTB/POZ domain-containing protein At3g56230... 0.04 OrthoFinder output from all 47 species
Zm00001e030560_P001 Zm00001e030560 BTB/POZ domain-containing protein At3g56230... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 128 223
No external refs found!