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  5. Sacu_v1.1_s0012.g005441

Sacu_v1.1_s0012.g005441


Description : small subunit of serine C-palmitoyltransferase complex & original description: CDS=1-318


Gene families : OG0008547 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008547_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0012.g005441
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0014.g013636 No alias small subunit of serine C-palmitoyltransferase complex &... 0.03 OrthoFinder output from all 47 species
Cba_g17934 No alias small subunit of serine C-palmitoyltransferase complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g43044 No alias small subunit of serine C-palmitoyltransferase complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
InterPro domains Description Start Stop
IPR024512 Ser_palmitoyltrfase_ssu-like 17 64
No external refs found!