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  5. Sacu_v1.1_s0011.g005369

Sacu_v1.1_s0011.g005369


Description : not classified & original description: CDS=1-840


Gene families : OG0000398 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000398_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005369
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene02754.t1 Aspi01Gene02754 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03830.t1 Aspi01Gene03830 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0035.g025543 No alias not classified & original description: CDS=1-204 0.02 OrthoFinder output from all 47 species
Azfi_s0055.g033893 No alias not classified & original description: CDS=1-486 0.02 OrthoFinder output from all 47 species
Azfi_s0066.g036050 No alias not classified & original description: CDS=1-384 0.04 OrthoFinder output from all 47 species
Azfi_s0204.g057695 No alias not classified & original description: CDS=1-1323 0.02 OrthoFinder output from all 47 species
Azfi_s0749.g085092 No alias not classified & original description: CDS=1-1635 0.02 OrthoFinder output from all 47 species
Azfi_s3121.g114603 No alias not classified & original description: CDS=1-351 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008219 No alias not classified & original description: CDS=48-314 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009620 No alias not classified & original description: CDS=1-324 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009659 No alias not classified & original description: CDS=1-201 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009660 No alias not classified & original description: CDS=2-256 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012416 No alias not classified & original description: CDS=1-396 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012646 No alias not classified & original description: CDS=1-300 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013341 No alias not classified & original description: CDS=72-293 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021465 No alias not classified & original description: CDS=1-630 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024225 No alias not classified & original description: CDS=1-729 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0246.g026702 No alias not classified & original description: CDS=1-423 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003852 2-isopropylmalate synthase activity IEP HCCA
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006177 GMP biosynthetic process IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006551 leucine metabolic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009098 leucine biosynthetic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032784 regulation of DNA-templated transcription elongation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046037 GMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR026960 RVT-Znf 196 273
No external refs found!