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  5. Sacu_v1.1_s0011.g005344

Sacu_v1.1_s0011.g005344


Description : regulatory protein of RNA homeostasis & original description: CDS=97-1326


Gene families : OG0000614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005344

Target Alias Description ECC score Gene Family Method Actions
Als_g23125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04427 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aop_g10028 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.38G012000.1 Ceric.38G012000 not classified & original description: pacid=50579791... 0.03 OrthoFinder output from all 47 species
Cre11.g476200 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g04722 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Lfl_g16999 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Lfl_g40942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_324587g0010 No alias C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Nbi_g07687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g072720.3.1 Solyc06g072720 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g26608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 286 311
IPR000571 Znf_CCCH 145 170
No external refs found!