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  5. Sacu_v1.1_s0011.g005327

Sacu_v1.1_s0011.g005327


Description : substrate adaptor of SCF E3 ubiquitin ligase complex & original description: CDS=1-1197


Gene families : OG0001617 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001617_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005327
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Aob_g40341 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Ceric.04G092300.1 Ceric.04G092300 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g19618 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Mp4g14980.1 No alias proteolytic chalcone synthase regulator (KFB-CHS).... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 12 51
No external refs found!