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  5. Ehy_g06073

Ehy_g06073 (SHI)


Aliases : SHI

Description : SRS-type transcription factor & original description: none


Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g06073
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00223800 SHI,... RNA biosynthesis.transcriptional activation.SRS... 0.02 OrthoFinder output from all 47 species
Adi_g043584 LRP1 SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24739 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G095600.1 SHI, Ceric.02G095600 SRS-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g21838 SRS1, STY1 SRS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g30942 SRS1, STY1 SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g084680.3.1 SRS1, STY1,... transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Solyc10g054070.1.1 SRS5, Solyc10g054070 transcription factor (SRS) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0045048 protein insertion into ER membrane IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!