1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0011.g005309

Sacu_v1.1_s0011.g005309 (NINJA)


Aliases : NINJA

Description : transcriptional co-repressor *(AFP/NINJA) & original description: CDS=1-2343


Gene families : OG0001010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001010_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005309
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Ceric.04G095100.1 NINJA, Ceric.04G095100 transcriptional co-repressor *(AFP/NINJA) & original... 0.04 OrthoFinder output from all 47 species
Ceric.34G010700.1 NINJA, Ceric.34G010700 not classified & original description: pacid=50622924... 0.03 OrthoFinder output from all 47 species
LOC_Os03g30570.1 AFP2, LOC_Os03g30570 transcriptional co-repressor (AFP/NINJA) 0.02 OrthoFinder output from all 47 species
Len_g16879 AFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02348 AFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g032680.2.1 AFP3, Solyc02g032680 transcriptional co-repressor (AFP/NINJA) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 753 775
No external refs found!