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Description : not classified & original description: CDS=65-3028
Gene families : OG0005057 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005057_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0011.g005276 | |
| Cluster | HCCA: Cluster_55 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aob_g10728 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g25750 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g38163 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g33502 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g13471 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g30821 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g28016 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g13510.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | HCCA |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005875 | microtubule associated complex | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
| BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007051 | spindle organization | IEP | HCCA |
| MF | GO:0010181 | FMN binding | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0022402 | cell cycle process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0051225 | spindle assembly | IEP | HCCA |
| CC | GO:0070652 | HAUS complex | IEP | HCCA |
| BP | GO:0070925 | organelle assembly | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:0140694 | non-membrane-bounded organelle assembly | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 699 | 746 |
| IPR002885 | Pentatricopeptide_repeat | 873 | 898 |
| IPR002885 | Pentatricopeptide_repeat | 179 | 204 |
| IPR002885 | Pentatricopeptide_repeat | 105 | 133 |
| IPR002885 | Pentatricopeptide_repeat | 573 | 593 |
| IPR002885 | Pentatricopeptide_repeat | 308 | 336 |
| IPR002885 | Pentatricopeptide_repeat | 280 | 302 |
| IPR002885 | Pentatricopeptide_repeat | 208 | 234 |
| IPR002885 | Pentatricopeptide_repeat | 801 | 831 |
| IPR002885 | Pentatricopeptide_repeat | 673 | 692 |
| No external refs found! |