Description : mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP trafficking complex & original description: CDS=1178-1837
Gene families : OG0000667 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000667_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g082290 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g14245 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.08G019300.1 | Ceric.08G019300 | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.24G052400.1 | Ceric.24G052400 | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000194.40 | No alias | RNA processing.messenger ribonucleoprotein particle... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01025009001 | No alias | RNA processing.messenger ribonucleoprotein particle... | 0.04 | OrthoFinder output from all 47 species | |
Gb_04102 | No alias | mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g00447 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g05319 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g09281 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g00624 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g086400.2.1 | Solyc10g086400 | mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species | |
Solyc11g073280.2.1 | Solyc11g073280 | mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
MF | GO:0004866 | endopeptidase inhibitor activity | IEP | HCCA |
MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | HCCA |
MF | GO:0005253 | monoatomic anion channel activity | IEP | HCCA |
MF | GO:0005254 | chloride channel activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006275 | regulation of DNA replication | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0008509 | monoatomic anion transmembrane transporter activity | IEP | HCCA |
BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015108 | chloride transmembrane transporter activity | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0023051 | regulation of signaling | IEP | HCCA |
MF | GO:0030414 | peptidase inhibitor activity | IEP | HCCA |
CC | GO:0030915 | Smc5-Smc6 complex | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
MF | GO:0061134 | peptidase regulator activity | IEP | HCCA |
MF | GO:0061135 | endopeptidase regulator activity | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
CC | GO:0106068 | SUMO ligase complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 77 | 145 |
No external refs found! |