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  5. Sacu_v1.1_s0011.g005251

Sacu_v1.1_s0011.g005251 (ATVDAC1, VDAC1)


Aliases : ATVDAC1, VDAC1

Description : voltage-gated anion channel *(VDAC) & original description: CDS=1-2169


Gene families : OG0000555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005251
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Aob_g01307 VDAC2, ATVDAC2 voltage-gated anion channel *(VDAC) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000829.10 VDAC2, ATVDAC2 Solute transport.porins.VDAC voltage-gated anion channel 0.02 OrthoFinder output from all 47 species
Dac_g11509 ATVDAC1, VDAC1 voltage-gated anion channel *(VDAC) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02482 ATVDAC1, VDAC1 voltage-gated anion channel *(VDAC) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06757 ATVDAC3, VDAC3 voltage-gated anion channel *(VDAC) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000115001 VDAC2, ATVDAC2 Mitochondrial outer membrane protein porin 2... 0.03 OrthoFinder output from all 47 species
Len_g10211 ATVDAC1, VDAC1 voltage-gated anion channel *(VDAC) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020554_P001 ATVDAC1, VDAC1,... voltage-gated anion channel (VDAC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004788 thiamine diphosphokinase activity IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009229 thiamine diphosphate biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030975 thiamine binding IEP HCCA
BP GO:0042357 thiamine diphosphate metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR027246 Porin_Euk/Tom40 6 243
IPR002885 Pentatricopeptide_repeat 509 531
IPR002885 Pentatricopeptide_repeat 687 708
IPR002885 Pentatricopeptide_repeat 532 562
IPR002885 Pentatricopeptide_repeat 399 446
IPR002885 Pentatricopeptide_repeat 614 658
No external refs found!