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  5. Sacu_v1.1_s0011.g005229

Sacu_v1.1_s0011.g005229


Description : not classified & original description: CDS=1-4110


Gene families : OG0001232 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001232_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005229
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT2G46380 No alias Protein of unknown function (DUF3133) 0.02 OrthoFinder output from all 47 species
Adi_g008083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G024400.1 Ceric.01G024400 not classified & original description: pacid=50592086... 0.03 OrthoFinder output from all 47 species
Ceric.13G064100.1 Ceric.13G064100 not classified & original description: pacid=50636849... 0.03 OrthoFinder output from all 47 species
Ppi_g47243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!