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  5. Sacu_v1.1_s0011.g005173

Sacu_v1.1_s0011.g005173


Description : component *(eEF1B-beta/-delta) of eEF1B eEF1A-GDP-recycling complex & original description: CDS=151-849


Gene families : OG0001031 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005173

Target Alias Description ECC score Gene Family Method Actions
AT5G19510 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.1 OrthoFinder output from all 47 species
Adi_g039465 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
Adi_g102190 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
Aev_g02832 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
Aev_g46718 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Ala_g00686 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Aop_g00342 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Aop_g17687 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Ceric.23G080700.1 Ceric.23G080700 component *(eEF1B-beta/-delta) of eEF1B... 0.05 OrthoFinder output from all 47 species
Ceric.32G024000.1 Ceric.32G024000 component *(eEF1B-beta/-delta) of eEF1B... 0.05 OrthoFinder output from all 47 species
Dac_g00420 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Ehy_g02379 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
GSVIVT01037374001 No alias Protein biosynthesis.translation elongation.eEF1B... 0.07 OrthoFinder output from all 47 species
LOC_Os07g46750.1 LOC_Os07g46750 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.07 OrthoFinder output from all 47 species
Len_g22684 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
Lfl_g22805 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
MA_102713g0020 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.03 OrthoFinder output from all 47 species
Mp8g01660.1 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.06 OrthoFinder output from all 47 species
Msp_g10669 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Nbi_g06059 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.06 OrthoFinder output from all 47 species
Nbi_g20482 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Pir_g08117 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Ppi_g04249 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
Sam_g14316 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Sam_g16177 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Sam_g17349 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.05 OrthoFinder output from all 47 species
Sam_g31515 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Sam_g49094 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
Solyc01g098000.3.1 Solyc01g098000 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.06 OrthoFinder output from all 47 species
Solyc07g016150.4.1 Solyc07g016150 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.03 OrthoFinder output from all 47 species
Solyc11g072190.2.1 Solyc11g072190 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.06 OrthoFinder output from all 47 species
Spa_g07922 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Spa_g07923 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.05 OrthoFinder output from all 47 species
Spa_g12874 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Spa_g21700 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Spa_g51035 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.05 OrthoFinder output from all 47 species
Tin_g21340 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Zm00001e035548_P001 Zm00001e035548 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.05 OrthoFinder output from all 47 species
Zm00001e035783_P001 Zm00001e035783 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0010024 phytochromobilin biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
BP GO:0051202 phytochromobilin metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR014038 EF1B_bsu/dsu_GNE 144 231
No external refs found!