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  5. Sacu_v1.1_s0011.g005121

Sacu_v1.1_s0011.g005121


Description : not classified & original description: CDS=1-2127


Gene families : OG0002688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002688_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005121
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01027909001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os03g01550.1 LOC_Os03g01550 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016609 No alias not classified & original description: CDS=28-3702 0.05 OrthoFinder output from all 47 species
Solyc08g081060.3.1 Solyc08g081060 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g090640.3.1 Solyc09g090640 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016485 protein processing IEP HCCA
BP GO:0016540 protein autoprocessing IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR021916 DUF3527 556 666
No external refs found!