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  5. Sacu_v1.1_s0011.g005106

Sacu_v1.1_s0011.g005106


Description : component *(uS5) of small ribosomal-subunit (SSU) proteome & original description: CDS=96-905


Gene families : OG0001457 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001457_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005106
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Aev_g10214 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Als_g12987 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Aop_g02040 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c20_18740V3.1 Pp3c20_18740 Ribosomal protein S5 family protein 0.01 OrthoFinder output from all 47 species
Spa_g13171 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e006090_P001 Zm00001e006090 component RPS2 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e011816_P001 Zm00001e011816 component RPS2 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005324 Ribosomal_S5_C 165 237
IPR013810 Ribosomal_S5_N 81 145
No external refs found!