Sacu_v1.1_s0010.g004935 (ATROP4, ROP4, ATGP3, ARAC5)

Aliases : ATROP4, ROP4, ATGP3, ARAC5

Description : small GTPase *(ROP) & original description: CDS=382-930

Gene families : OG0000503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0010.g004935
Cluster	HCCA: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00109p00095870	ARAC7, ROP9,...	Multi-process regulation.Rop GTPase regulatory...	0.03	OrthoFinder output from all 47 species
Adi_g053481	ARAC3, RAC3,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g23892	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g03079	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene15444.t1	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene35809.t1	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene50526.t1	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g14200	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.36G016200.1	ARAC3, RAC3,...	small GTPase *(ROP) & original description:...	0.03	OrthoFinder output from all 47 species
GSVIVT01009947001	ATRAC1, ROP3,...	Multi-process regulation.Rop GTPase regulatory...	0.03	OrthoFinder output from all 47 species
LOC_Os02g20850.1	ATRAC1, ROP3,...	small GTPase (ROP)	0.02	OrthoFinder output from all 47 species
Len_g13885	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g36377	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g01865	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g05700	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g27441	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g04924	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g07595	No alias	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g08722	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g23832	No alias	small GTPase *(ROP) & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g27850	No alias	small GTPase *(ROP) & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g51141	No alias	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g01671	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	62	174

External Links

No external refs found!

Sacu_v1.1_s0010.g004935 (ATROP4, ROP4, ATGP3, ARAC5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation