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  5. Sacu_v1.1_s0009.g004568

Sacu_v1.1_s0009.g004568 (ATBT1, EMB42, EMB104, SHS1)


Aliases : ATBT1, EMB42, EMB104, SHS1

Description : solute transporter *(MTCC) & original description: CDS=122-1375


Gene families : OG0002083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0009.g004568

Target Alias Description ECC score Gene Family Method Actions
Adi_g092482 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23239 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09062 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14163 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03056 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03903 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03737 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e037324_P001 ATBT1, EMB42,... solute transporter (MTCC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 267 353
IPR018108 Mitochondrial_sb/sol_carrier 362 453
IPR018108 Mitochondrial_sb/sol_carrier 176 260
No external refs found!