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  5. Sacu_v1.1_s0009.g004448

Sacu_v1.1_s0009.g004448


Description : threonylcarbamoyladenosine methylthiotransferase & original description: CDS=79-1899


Gene families : OG0005936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005936_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0009.g004448

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00137140 evm_27.TU.AmTr_v1... RNA processing.RNA modification.methylthiolation.tRNA... 0.03 OrthoFinder output from all 47 species
Ehy_g12787 No alias threonylcarbamoyladenosine methylthiotransferase &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0035596 methylthiotransferase activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013848 Methylthiotransferase_N 52 130
IPR007197 rSAM 190 362
No external refs found!