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  5. Sacu_v1.1_s0008.g004301

Sacu_v1.1_s0008.g004301


Description : not classified & original description: CDS=236-1852


Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0008.g004301

Target Alias Description ECC score Gene Family Method Actions
Adi_g088925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000863.14 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.01 OrthoFinder output from all 47 species
Cre03.g177350 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.02 OrthoFinder output from all 47 species
Pir_g08828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR021825 RETICULATA-related 349 480
No external refs found!