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  5. Sacu_v1.1_s0008.g004211

Sacu_v1.1_s0008.g004211


Description : actin stability co-factor *(PMIR) & original description: CDS=1-3078


Gene families : OG0001272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0008.g004211
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00146p00039020 evm_27.TU.AmTr_v1... Cytoskeleton.cp-actin-dependent plastid movement.PMIR... 0.03 OrthoFinder output from all 47 species
Als_g15578 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16853 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 110 251
IPR018392 LysM_dom 979 1023
No external refs found!