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  5. Sacu_v1.1_s0008.g004140

Sacu_v1.1_s0008.g004140


Description : not classified & original description: CDS=1-3387


Gene families : OG0000936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000936_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0008.g004140
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Ala_g02022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g41374 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g21161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013398 No alias not classified & original description: CDS=1-2496 0.04 OrthoFinder output from all 47 species
Spa_g12720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010730 HET 501 587
No external refs found!